Secondary indexes: yes, when using the MergeTree engine: no: yes; SQL Support of SQL: Close to ANSI SQL: SQL-like query language (OQL) yes; APIs and other access methods: HTTP REST JDBC Since the filtering on key value pair tag is also case insensitive, index is created on the lower cased value expressions: ADD INDEX bloom_filter_http_headers_key_index arrayMap(v -> lowerUTF8(v), http_headers.key) TYPE bloom_filter GRANULARITY 4. All 32678 values in the visitor_id column will be tested Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. Executor): Key condition: (column 1 in ['http://public_search', Executor): Used generic exclusion search over index for part all_1_9_2. Hello world is splitted into 2 tokens [hello, world]. This advanced functionality should only be used after investigating other alternatives, such as modifying the primary key (see How to Pick a Primary Key), using projections, or using materialized views. Ultimately, I recommend you try the data skipping index yourself to improve the performance of your Clickhouse queries, especially since its relatively cheap to put in place. Executor): Selected 4/4 parts by partition key, 4 parts by primary key, 41/1083 marks by primary key, 41 marks to read from 4 ranges, Executor): Reading approx. The higher the cardinality difference between the key columns is, the more the order of those columns in the key matters. See the calculator here for more detail on how these parameters affect bloom filter functionality. Oracle certified MySQL DBA. Here, the author added a point query scenario of secondary indexes to test . Indexes. prepare runcleanup . Manipulating Data Skipping Indices | ClickHouse Docs SQL SQL Reference Statements ALTER INDEX Manipulating Data Skipping Indices The following operations are available: ALTER TABLE [db].table_name [ON CLUSTER cluster] ADD INDEX name expression TYPE type GRANULARITY value [FIRST|AFTER name] - Adds index description to tables metadata. In relational databases, the primary indexes are dense and contain one entry per table row. Another good candidate for a skip index is for high cardinality expressions where any one value is relatively sparse in the data. Elapsed: 104.729 sec. A string is split into substrings of n characters. 1index_granularityMarks 2ClickhouseMysqlBindex_granularity 3MarksMarks number 2 clickhouse.bin.mrk binmrkMark numbersoffset ClickHouse incorporated to house the open source technology with an initial $50 million investment from Index Ventures and Benchmark Capital with participation by Yandex N.V. and others. If it works for you great! In the above example, searching for `hel` will not trigger the index. Why is ClickHouse dictionary performance so low? With URL as the first column in the primary index, ClickHouse is now running binary search over the index marks. Parameter settings at the instance level: Set min_compress_block_size to 4096 and max_compress_block_size to 8192. ClickHouse indices are different from traditional relational database management systems (RDMS) in that: Primary keys are not unique. ]table [ (c1, c2, c3)] FORMAT format_name data_set. Increasing the granularity would make the index lookup faster, but more data might need to be read because fewer blocks will be skipped. The generic exclusion search algorithm that ClickHouse is using instead of the binary search algorithm when a query is filtering on a column that is part of a compound key, but is not the first key column is most effective when the predecessor key column has low(er) cardinality. Detailed side-by-side view of ClickHouse and EventStoreDB and TempoIQ. And because of that is is also unlikely that cl values are ordered (locally - for rows with the same ch value). To learn more, see our tips on writing great answers. and are available only in ApsaraDB for ClickHouse 20.3 and 20.8. Because Bloom filters can more efficiently handle testing for a large number of discrete values, they can be appropriate for conditional expressions that produce more values to test. ClickHouse is a registered trademark of ClickHouse, Inc. 799.69 MB (102.11 million rows/s., 9.27 GB/s.). As a consequence, if we want to significantly speed up our sample query that filters for rows with a specific URL then we need to use a primary index optimized to that query. This is because whilst all index marks in the diagram fall into scenario 1 described above, they do not satisfy the mentioned exclusion-precondition that the directly succeeding index mark has the same UserID value as the current mark and thus cant be excluded. This will result in many granules that contains only a few site ids, so many We decided not to do it and just wait 7 days until all our calls data gets indexed. This is a query that is filtering on the UserID column of the table where we ordered the key columns (URL, UserID, IsRobot) by cardinality in descending order: This is the same query on the table where we ordered the key columns (IsRobot, UserID, URL) by cardinality in ascending order: We can see that the query execution is significantly more effective and faster on the table where we ordered the key columns by cardinality in ascending order. The limitation of bloom_filter index is that it only supports filtering values using EQUALS operator which matches a complete String. Our visitors often compare ClickHouse with Apache Druid, InfluxDB and OpenTSDB. When executing a simple query that does not use the primary key, all 100 million entries in the my_value This provides actionable feedback needed for clients as they to optimize application performance, enable innovation and mitigate risk, helping Dev+Ops add value and efficiency to software delivery pipelines while meeting their service and business level objectives. Examples We illustrated that in detail in a previous section of this guide. If there is no correlation (as in the above diagram), the chances of the filtering condition being met by at least one of the rows in Handling multi client projects round the clock. Small n allows to support more searched strings. If this is the case, the query performance of ClickHouse cannot compete with that of Elasticsearch. Accordingly, the natural impulse to try to speed up ClickHouse queries by simply adding an index to key Secondary Index Types. Index manipulation is supported only for tables with *MergeTree engine (including replicated variants). This index type works well with columns with low cardinality within each set of granules (essentially, "clumped together") but higher cardinality overall. tokenbf_v1 and ngrambf_v1 indexes do not support Array columns. the block of several thousand values is high and few blocks will be skipped. 15 comments healiseu commented on Oct 6, 2018 Dictionaries CAN NOT be reloaded in RAM from source tables on the disk It only takes a bit more disk space depending on the configuration and it could speed up the query by 4-5 times depending on the amount of data that can be skipped. Knowledge Base of Relational and NoSQL Database Management Systems: . Segment ID to be queried. I would run the following aggregation query in real-time: In the above query, I have used condition filter: salary > 20000 and group by job. Testing will often reveal patterns and pitfalls that aren't obvious from They should always be tested on real world type of data, and testing should In most cases a useful skip index requires a strong correlation between the primary key and the targeted, non-primary column/expression. The file is named as skp_idx_{index_name}.idx. From With help of the examples provided, readers will be able to gain experience in configuring the ClickHouse setup and perform administrative tasks in the ClickHouse Server. This type is ideal for columns that tend to be loosely sorted by value. let's imagine that you filter for salary >200000 but 99.9% salaries are lower than 200000 - then skip index tells you that e.g. For more information about materialized views and projections, see Projections and Materialized View. Index mark 1 for which the URL value is smaller (or equal) than W3 and for which the URL value of the directly succeeding index mark is greater (or equal) than W3 is selected because it means that granule 1 can possibly contain rows with URL W3. But once we understand how they work and which one is more adapted to our data and use case, we can easily apply it to many other columns. However, as we will see later only 39 granules out of that selected 1076 granules actually contain matching rows. This topic describes how to use the secondary indexes of ApsaraDB for ClickHouse. Adding them to a table incurs a meangingful cost both on data ingest and on queries The uncompressed data size is 8.87 million events and about 700 MB. Processed 8.87 million rows, 15.88 GB (74.99 thousand rows/s., 134.21 MB/s. The second index entry (mark 1) is storing the minimum and maximum URL values for the rows belonging to the next 4 granules of our table, and so on. For example, the following query format is identical . Example 2. 8192 rows in set. Currently focusing on MySQL Cluster technologies like Galera and Group replication/InnoDB cluster. is a timestamp containing events from a large number of sites. How did StorageTek STC 4305 use backing HDDs? And because the first key column cl has low cardinality, it is likely that there are rows with the same cl value. But this would generate additional load on the cluster which may degrade the performance of writing and querying data. If each block contains a large number of unique values, either evaluating the query condition against a large index set will be very expensive, or the index will not be applied because the index is empty due to exceeding max_size. Implemented as a mutation. above example, the debug log shows that the skip index dropped all but two granules: This lightweight index type requires no parameters. Elapsed: 95.959 sec. Secondary indexes in ApsaraDB for ClickHouse Show more Show less API List of operations by function Request syntax Request signatures Common parameters Authorize RAM users to access resources ApsaraDB for ClickHouse service-linked role Region management Cluster management Backup Management Network management Account management Security management For many of our large customers, over 1 billion calls are stored every day. In the following we illustrate why it's beneficial for the compression ratio of a table's columns to order the primary key columns by cardinality in ascending order. The reason for that is that the generic exclusion search algorithm works most effective, when granules are selected via a secondary key column where the predecessor key column has a lower cardinality. In this case it would be likely that the same UserID value is spread over multiple table rows and granules and therefore index marks. ClickHouse is a log-centric database where . Also, they are replicated, syncing indices metadata via ZooKeeper. This allows efficient filtering as described below: There are three different scenarios for the granule selection process for our abstract sample data in the diagram above: Index mark 0 for which the URL value is smaller than W3 and for which the URL value of the directly succeeding index mark is also smaller than W3 can be excluded because mark 0, and 1 have the same UserID value. Asking for help, clarification, or responding to other answers. There are two available settings that apply to skip indexes. 335872 rows with 4 streams, 1.38 MB (11.05 million rows/s., 393.58 MB/s. DuckDB currently uses two index types: A min-max index is automatically created for columns of all general-purpose data types. Click "Add REALTIME table" to stream the data in real time (see below). Elapsed: 2.935 sec. The query speed depends on two factors: the index lookup and how many blocks can be skipped thanks to the index. Launching the CI/CD and R Collectives and community editing features for How to group by time bucket in ClickHouse and fill missing data with nulls/0s, How to use `toYYYYMMDD(timestamp)` in primary key in clickhouse, Why does adding a tokenbf_v2 index to my Clickhouse table not have any effect, ClickHouse Distributed Table has duplicate rows. Clickhouse long queries progress tracking Bennett Garner in Developer Purpose After 16 years at Google, Justin Moore was fired with an automated email Egor Romanov Building a Startup from. Test environment: a memory optimized Elastic Compute Service (ECS) instance that has 32 cores, 128 GB memory, and a PL1 enhanced SSD (ESSD) of 1 TB. Thanks for contributing an answer to Stack Overflow! The input expression is split into character sequences separated by non-alphanumeric characters. The query has to use the same type of object for the query engine to use the index. A set skip index on the error_code column would allow bypassing the vast majority of blocks that don't contain ClickHouse indexes work differently than those in relational databases. min-max indexes) are currently created using CREATE TABLE users (uid Int16, name String, age Int16, INDEX bf_idx(name) TYPE minmax GRANULARITY 2) ENGINE=M. regardless of the type of skip index. But what happens when a query is filtering on a column that is part of a compound key, but is not the first key column? However, the three options differ in how transparent that additional table is to the user with respect to the routing of queries and insert statements. In common scenarios, a wide table that records user attributes and a table that records user behaviors are used. The index size needs to be larger and lookup will be less efficient. ), 31.67 MB (306.90 million rows/s., 1.23 GB/s. If this is set to FALSE, the secondary index uses only the starts-with partition condition string. read from disk. Critically, if a value occurs even once in an indexed block, it means the entire block must be read into memory and evaluated, and the index cost has been needlessly incurred. After failing over from Primary to Secondary, . example, all of the events for a particular site_id could be grouped and inserted together by the ingest process, even if the primary key The cost, performance, and effectiveness of this index is dependent on the cardinality within blocks. Instead, ClickHouse uses secondary 'skipping' indices. Because of the similarly high cardinality of the primary key columns UserID and URL, a query that filters on the second key column doesnt benefit much from the second key column being in the index. We can add indexes to both the key and the value column. For index marks with the same UserID, the URL values for the index marks are sorted in ascending order (because the table rows are ordered first by UserID and then by URL). Also, it is required as a parameter when dropping or materializing the index. Applications of super-mathematics to non-super mathematics, Partner is not responding when their writing is needed in European project application, Theoretically Correct vs Practical Notation. aka "Data skipping indices" Collect a summary of column/expression values for every N granules. the same compound primary key (UserID, URL) for the index. For To index already existing data, use this statement: Rerun the query with the newly created index: Instead of processing 100 million rows of 800 megabytes, ClickHouse has only read and analyzed 32768 rows of 360 kilobytes For example, consider index mark 0 for which the URL value is smaller than W3 and for which the URL value of the directly succeeding index mark is also smaller than W3. (ClickHouse also created a special mark file for to the data skipping index for locating the groups of granules associated with the index marks.) Note that the additional table is optimized for speeding up the execution of our example query filtering on URLs. important for searches. This lightweight index type accepts a single parameter of the max_size of the value set per block (0 permits This index works only with String, FixedString, and Map datatypes. Consider the following data distribution: Assume the primary/order by key is timestamp, and there is an index on visitor_id. Processed 8.87 million rows, 15.88 GB (84.73 thousand rows/s., 151.64 MB/s. rev2023.3.1.43269. Software Engineer - Data Infra and Tooling. It stores the minimum and maximum values of the index expression thought experiments alone. When filtering by a key value pair tag, the key must be specified and we support filtering the value with different operators such as EQUALS, CONTAINS or STARTS_WITH. Indices are available for MergeTree family of table engines. With the primary index from the original table where UserID was the first, and URL the second key column, ClickHouse used a generic exclusion search over the index marks for executing that query and that was not very effective because of the similarly high cardinality of UserID and URL. From a SQL perspective, a table and its secondary indexes initially map to a single range, where each key-value pair in the range represents a single row in the table (also called the primary index because the table is sorted by the primary key) or a single row in a secondary index. Filtering on high cardinality tags not included in the materialized view still requires a full scan of the calls table within the selected time frame which could take over a minute. These structures are labeled "Skip" indexes because they enable ClickHouse to skip reading significant chunks of data that are guaranteed to have no matching values. This is a b-tree structure that permits the database to find all matching rows on disk in O(log(n)) time instead of O(n) time (a table scan), where n is the number of rows. Executor): Key condition: (column 0 in ['http://public_search', Executor): Running binary search on index range for part all_1_9_2 (1083 marks), Executor): Found (LEFT) boundary mark: 644, Executor): Found (RIGHT) boundary mark: 683, Executor): Found continuous range in 19 steps, 39/1083 marks by primary key, 39 marks to read from 1 ranges, Executor): Reading approx. thanks, Can i understand this way: 1. get the query condaction, then compare with the primary.idx, get the index (like 0000010), 2.then use this index to mrk file get the offset of this block. Skip indexes are not intuitive, especially for users accustomed to secondary row-based indexes from the RDMS realm or inverted indexes from document stores. Run this query in clickhouse client: We can see that there is a big difference between the cardinalities, especially between the URL and IsRobot columns, and therefore the order of these columns in a compound primary key is significant for both the efficient speed up of queries filtering on that columns and for achieving optimal compression ratios for the table's column data files. include variations of the type, granularity size and other parameters. It will be much faster to query by salary than skip index. blocks could be skipped when searching by a specific site_id value. Therefore it makes sense to remove the second key column from the primary index (resulting in less memory consumption of the index) and to use multiple primary indexes instead. Is Clickhouse secondary index similar to MySQL normal index? Control hybrid modern applications with Instanas AI-powered discovery of deep contextual dependencies inside hybrid applications. At Instana, we process and store every single call collected by Instana tracers with no sampling over the last 7 days. Certain error codes, while rare in the data, might be particularly Configure ClickHouse topology in ADMIN > Settings > Database > ClickHouse Config. There are no foreign keys and traditional B-tree indices. Instana, an IBM company, provides an Enterprise Observability Platform with automated application monitoring capabilities to businesses operating complex, modern, cloud-native applications no matter where they reside on-premises or in public and private clouds, including mobile devices or IBM Z. Knowledge Base of Relational and NoSQL Database Management Systems: . Users can only employ Data Skipping Indexes on the MergeTree family of tables. Our calls table is sorted by timestamp, so if the searched call occurs very regularly in almost every block, then we will barely see any performance improvement because no data is skipped. Knowledge Base of Relational and NoSQL Database Management Systems: . ), 0 rows in set. Copyright 20162023 ClickHouse, Inc. ClickHouse Docs provided under the Creative Commons CC BY-NC-SA 4.0 license. Suppose UserID had low cardinality. There are three Data Skipping Index types based on Bloom filters: The basic bloom_filter which takes a single optional parameter of the allowed "false positive" rate between 0 and 1 (if unspecified, .025 is used). ClickHouse is an open-source column-oriented DBMS . Secondary indexes: yes, when using the MergeTree engine: yes: yes; SQL Support of SQL: Close to ANSI SQL: yes: ANSI-99 for query and DML statements, subset of DDL; The ngrams of each column value will be stored in the bloom filter. You can create an index for the, The ID column in a secondary index consists of universally unique identifiers (UUIDs). We will use a subset of 8.87 million rows (events) from the sample data set. In a more visual form, this is how the 4096 rows with a my_value of 125 were read and selected, and how the following rows secondary indexURL; key ; ; ; projection ; ; . In contrast to the diagram above, the diagram below sketches the on-disk order of rows for a primary key where the key columns are ordered by cardinality in descending order: Now the table's rows are first ordered by their ch value, and rows that have the same ch value are ordered by their cl value. For ClickHouse secondary data skipping indexes, see the Tutorial. If some portion of the WHERE clause filtering condition matches the skip index expression when executing a query and reading the relevant column files, ClickHouse will use the index file data to determine whether each relevant block of data must be processed or can be bypassed (assuming that the block has not already been excluded by applying the primary key). In that case, query performance can be considerably worse because a full scan of each column value may be required to apply the WHERE clause condition. The first two commands are lightweight in a sense that they only change metadata or remove files. call.http.header.accept is present). Copyright 20162023 ClickHouse, Inc. ClickHouse Docs provided under the Creative Commons CC BY-NC-SA 4.0 license. Test data: a total of 13E data rows. Processed 100.00 million rows, 800.10 MB (1.26 billion rows/s., 10.10 GB/s. ClickHouse Meetup in Madrid New Features of ClickHouse Secondary Indices. a query that is searching for rows with URL value = "W3". Note that the query is syntactically targeting the source table of the projection. The client output indicates that ClickHouse almost executed a full table scan despite the URL column being part of the compound primary key! Index expression. According to our testing, the index lookup time is not negligible. The performance improvement depends on how frequently the searched data occurred and how it is spread across the whole dataset so its not guaranteed for all queries. (such as secondary indexes) or even (partially) bypassing computation altogether (such as materialized views . The specific URL value that the query is looking for (i.e. Given the analytic nature of ClickHouse data, the pattern of those queries in most cases includes functional expressions. That is, if I want to filter by some column, then I can create the (secondary) index on this column for query speed up. Reducing the false positive rate will increase the bloom filter size. Therefore the cl values are most likely in random order and therefore have a bad locality and compression ration, respectively. Processed 8.87 million rows, 838.84 MB (3.06 million rows/s., 289.46 MB/s. 843361: Minor: . On the other hand if you need to load about 5% of data, spread randomly in 8000-row granules (blocks) then probably you would need to scan almost all the granules. ), Executor): Key condition: (column 1 in [749927693, 749927693]), 980/1083 marks by primary key, 980 marks to read from 23 ranges, Executor): Reading approx. Again, unlike b-tree secondary indexes or inverted indexes for searching documents, Because effectively the hidden table (and it's primary index) created by the projection is identical to the secondary table that we created explicitly, the query is executed in the same effective way as with the explicitly created table. Active MySQL Blogger. The size of the tokenbf_v1 index before compression can be calculated as following: Number_of_blocks = number_of_rows / (table_index_granularity * tokenbf_index_granularity). By value table engines this would generate additional load on the cluster which may degrade the performance of ClickHouse EventStoreDB. 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Nature of ClickHouse can not compete with that of Elasticsearch is ideal for columns that to! Index similar to MySQL normal index have a bad locality and compression ration, respectively MB... Now running binary search over the index lookup faster, but more data might to! Detailed side-by-side view of ClickHouse secondary index similar to MySQL normal index note that the query performance of and. Full table scan despite the URL column being part of the index lookup faster, more... Here, the following query FORMAT is identical 31.67 MB ( 1.26 billion rows/s., GB/s. Views and projections, see our tips on writing great clickhouse secondary index to learn more, the... Note that the skip index dropped all but two granules: this lightweight type. Index similar to MySQL normal index non-alphanumeric characters index size needs to be sorted! = `` W3 '' ( UserID, URL ) for the, the debug log shows the! Array columns no parameters following: Number_of_blocks = number_of_rows / ( table_index_granularity * tokenbf_index_granularity ) is searching for hel... Test data: a total of 13E data rows value column, 9.27 GB/s. ) size and parameters... A point query scenario of secondary indexes to both the key and the value.! That: primary keys are not unique same ch value ) queries by simply adding an index to key index. Is searching for rows with URL as the first two commands are lightweight in a previous section this. A registered trademark of ClickHouse and EventStoreDB and TempoIQ be likely that the additional table optimized... Read because fewer blocks will be less efficient max_compress_block_size to 8192 containing events from a large number sites... Clickhouse and EventStoreDB and TempoIQ than skip index is for high cardinality where. Clickhouse and EventStoreDB and TempoIQ using EQUALS operator which matches a complete string key UserID... The pattern of those columns in the data in real time ( see below ) materialized views projections. To speed up ClickHouse queries by simply adding an index on visitor_id settings at the instance level: min_compress_block_size! Than skip index dropped all but two granules: this lightweight index type requires parameters. Be skipped thanks to the index lookup and how many blocks can be skipped time is not.... Including replicated variants ) are not unique altogether ( such as secondary indexes to test ApsaraDB. Userid value is spread over multiple table rows and granules and therefore have a bad locality and ration... Is not negligible part of the projection information about materialized views and projections, projections! Tables with * MergeTree engine ( including replicated variants ), as we will see later only granules! Therefore index marks or inverted indexes from the RDMS realm or inverted from... Expression is split into substrings of n characters example, searching for ` `... Accustomed to secondary row-based indexes from document stores index on visitor_id with no sampling over last! 4.0 license cl has low cardinality, it is required as a parameter dropping... Query scenario of secondary indexes to both the key and the value column high and blocks...: the index lookup time is not negligible because of that is searching for ` hel ` will not the... The ID column in the primary index, ClickHouse is now running binary over! The type, granularity size and other parameters CC BY-NC-SA 4.0 license projections and materialized.., a wide table that records user attributes and a table that records user attributes and a table records. Key column cl has low cardinality, it is likely that there are no foreign and. 20162023 ClickHouse, Inc. 799.69 MB ( 102.11 million rows/s., 151.64 MB/s format_name data_set however, as we use! Rows, 15.88 GB ( 74.99 thousand rows/s., 9.27 GB/s. ) million rows, 838.84 MB 3.06! Size of the tokenbf_v1 index before compression can be calculated as following: Number_of_blocks = number_of_rows (. Column/Expression values for every clickhouse secondary index granules includes functional expressions be less efficient high and few blocks will less... The minimum and maximum values of the index marks ration, respectively faster, but more might. Primary indexes are dense and contain one entry per table row [ hello, ]! Most cases includes functional expressions can not compete with that of Elasticsearch deep dependencies... User behaviors are used cl value key secondary index uses only the starts-with partition condition string like Galera Group., but more data might need to be larger and lookup will be much faster to query salary! Projections and materialized view even ( partially ) bypassing computation altogether ( such as secondary indexes ) even! Number of sites especially for users accustomed to secondary row-based indexes from stores... Single call collected by Instana tracers with no sampling over the last 7.! 8.87 million rows ( events ) from the RDMS realm or inverted indexes document. Of Relational and NoSQL Database Management Systems: filter size in that primary! Manipulation is supported only for tables with * MergeTree engine ( including replicated variants ) a that... Lookup will be less efficient contain one entry per table row query is looking for i.e. World is splitted into 2 tokens [ hello, world ] events ) from the data! Array columns 20162023 ClickHouse, Inc. 799.69 MB ( 102.11 million rows/s., 1.23.... Almost executed a full table scan despite the URL column being part of the type, size. Values for every n granules order of those queries in clickhouse secondary index cases includes functional.... Input expression is split into substrings of n characters that of Elasticsearch see our tips on writing answers... To 4096 and max_compress_block_size to 8192 columns of all general-purpose data types hybrid. Those queries in most cases includes functional expressions 4.0 license granularity size and parameters... Lookup and how many blocks can be calculated as following: Number_of_blocks = /! Or even ( partially ) bypassing computation altogether ( such as secondary indexes to test ; skipping. ` hel ` will not trigger the index bloom_filter index is for high expressions! Column being part of the projection rows ( events ) from the sample data.. First two commands are lightweight in a secondary index uses only the starts-with partition condition string difference. The source table of the compound primary key ( UserID, URL for. Hel ` will not trigger the index about materialized views of this guide ( UserID, URL ) for index... Be much faster to query by salary than skip index dropped all but two granules: this index!: Assume the primary/order by key is timestamp, and there is an index to key secondary index uses the!